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  5. Solyc05g006470.4.1

Solyc05g006470.4.1 (ARPC1A, ARPC1, Solyc05g006470)


Aliases : ARPC1A, ARPC1, Solyc05g006470

Description : component ArpC1 of Arp2/3 actin polymerization initiation complex


Gene families : OG0005887 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005887_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g006470.4.1

Target Alias Description ECC score Gene Family Method Actions
Aob_g16405 ARPC1A, ARPC1 component *(ArpC1) of Arp2/3 actin polymerization... 0.03 OrthoFinder output from all 47 species
Aop_g26066 ARPC1A, ARPC1 component *(ArpC1) of Arp2/3 actin polymerization... 0.04 OrthoFinder output from all 47 species
Cba_g02482 ARPC1A, ARPC1 component *(ArpC1) of Arp2/3 actin polymerization... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021348.82 No alias No description available 0.02 OrthoFinder output from all 47 species
Ehy_g04516 ARPC1A, ARPC1 component *(ArpC1) of Arp2/3 actin polymerization... 0.05 OrthoFinder output from all 47 species
Mp4g21650.1 ARPC1A, ARPC1 component ArpC1 of Arp2/3 actin polymerization initiation complex 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005582 ARPC1A, ARPC1 component *(ArpC1) of Arp2/3 actin polymerization... 0.03 OrthoFinder output from all 47 species
Zm00001e023603_P001 ARPC1A, ARPC1,... component ArpC1 of Arp2/3 actin polymerization initiation complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP HCCA
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP HCCA
MF GO:0005347 ATP transmembrane transporter activity IEP HCCA
MF GO:0005471 ATP:ADP antiporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006862 nucleotide transport IEP HCCA
MF GO:0008514 organic anion transmembrane transporter activity IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
MF GO:0015215 nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015217 ADP transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
CC GO:0035658 Mon1-Ccz1 complex IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR024977 Apc4_WD40_dom 104 172
IPR001680 WD40_repeat 44 82
No external refs found!