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  5. Solyc05g005470.4.1

Solyc05g005470.4.1 (Solyc05g005470)


Aliases : Solyc05g005470

Description : nucleoredoxin


Gene families : OG0001689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001689_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g005470.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00109800 evm_27.TU.AmTr_v1... Redox homeostasis.cytosol/mitochondrion/nucleus redox... 0.03 OrthoFinder output from all 47 species
AMTR_s00131p00113720 evm_27.TU.AmTr_v1... Redox homeostasis.cytosol/mitochondrion/nucleus redox... 0.02 OrthoFinder output from all 47 species
Ala_g27004 No alias EC_1.8 oxidoreductase acting on sulfur group of donor &... 0.03 OrthoFinder output from all 47 species
Gb_30886 No alias nucleoredoxin 0.04 OrthoFinder output from all 47 species
LOC_Os01g58194.1 LOC_Os01g58194 nucleoredoxin 0.04 OrthoFinder output from all 47 species
LOC_Os03g29244.1 LOC_Os03g29244 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Sam_g35754 No alias EC_1.8 oxidoreductase acting on sulfur group of donor &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR012336 Thioredoxin-like_fold 194 284
IPR012336 Thioredoxin-like_fold 34 127
No external refs found!