1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g082830.3.1

Solyc04g082830.3.1 (Solyc04g082830)


Aliases : Solyc04g082830

Description : auxin efflux transporter (PILS). auxin transporter (PILS)


Gene families : OG0000887 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000887_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g082830.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00171470 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.04 OrthoFinder output from all 47 species
AMTR_s00105p00107360 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
Adi_g080154 No alias auxin transporter *(PILS) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110419 No alias auxin transporter *(PILS) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23474 No alias auxin transporter *(PILS) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g36791 No alias auxin transporter *(PILS) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12635 No alias auxin transporter *(PILS) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022629001 No alias Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
GSVIVT01026429001 No alias Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
Gb_31809 No alias auxin efflux transporter (PILS). auxin transporter (PILS) 0.03 OrthoFinder output from all 47 species
LOC_Os09g31478.1 LOC_Os09g31478 auxin efflux transporter (PILS). auxin transporter (PILS) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005224 No alias auxin transporter *(PILS) & original description: CDS=1-699 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR004776 Mem_trans 10 399
No external refs found!