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  5. Solyc04g082590.3.1

Solyc04g082590.3.1 (Solyc04g082590)


Aliases : Solyc04g082590

Description : no hits & (original description: none)


Gene families : OG0008219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g082590.3.1
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AT1G42480 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
Cre16.g661700 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_26038 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g02524.1 LOC_Os02g02524 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Nbi_g13624 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR021852 DUF3456 63 203
No external refs found!