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  5. Solyc04g082430.3.1

Solyc04g082430.3.1 (CYCB2;4, Solyc04g082430)


Aliases : CYCB2;4, Solyc04g082430

Description : cyclin (CYCB)


Gene families : OG0000745 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000745_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g082430.3.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00032080 CYCB2;3,... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.05 OrthoFinder output from all 47 species
AMTR_s00101p00131830 CYCB1;1, CYCB1,... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.03 OrthoFinder output from all 47 species
AT1G20610 CYCB2;3 Cyclin B2;3 0.05 OrthoFinder output from all 47 species
AT1G76310 CYCB2;4 CYCLIN B2;4 0.08 OrthoFinder output from all 47 species
AT2G17620 CYCB2;1 Cyclin B2;1 0.04 OrthoFinder output from all 47 species
AT2G26760 CYCB1;4 Cyclin B1;4 0.04 OrthoFinder output from all 47 species
AT3G11520 CYCB1;3, CYC2 CYCLIN B1;3 0.04 OrthoFinder output from all 47 species
AT4G35620 CYCB2;2 Cyclin B2;2 0.06 OrthoFinder output from all 47 species
AT5G06150 CYCB1;2, CYC1BAT Cyclin family protein 0.02 OrthoFinder output from all 47 species
Ala_g23920 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Als_g15872 CYCB1;2, CYC1BAT not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g52020 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Als_g58773 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Aop_g07135 CYCB2;4 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene31815.t1 CYCB2;3, Aspi01Gene31815 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene63213.t2 CYCB2;3, Aspi01Gene63213 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0065.g035814 CYCB2;3 component *(MED19) of head module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
Ceric.06G046300.1 CYCB2;3, Ceric.06G046300 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ceric.18G071600.1 CYCB2;3, Ceric.18G071600 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ceric.21G047800.1 CYCB2;3, Ceric.21G047800 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ceric.24G055000.1 CYCB2;3, Ceric.24G055000 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ceric.26G002300.1 CYCB2;3, Ceric.26G002300 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ceric.31G034200.1 CYCB2;3, Ceric.31G034200 regulatory protein *(CYCB) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000769.38 CYCB2;1 Cell cycle.regulation.cyclins.CYCB-type cyclin 0.01 OrthoFinder output from all 47 species
Cre08.g370401 CYCB2;2 Cyclin-B2-2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g17049 CYCB2;4 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Dcu_g01163 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Dcu_g03733 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Dcu_g08761 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Dde_g47954 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01009895001 CYCB2;3 Cell cycle.regulation.cyclins.CYCB-type cyclin 0.06 OrthoFinder output from all 47 species
GSVIVT01025781001 CYCB1;2, CYC1BAT Cell cycle.regulation.cyclins.CYCB-type cyclin 0.06 OrthoFinder output from all 47 species
GSVIVT01032782001 CYCB1;2, CYC1BAT Cell cycle.regulation.cyclins.CYCB-type cyclin 0.04 OrthoFinder output from all 47 species
GSVIVT01036739001 CYCB3;1 Cell cycle.regulation.cyclins.CYCB-type cyclin 0.06 OrthoFinder output from all 47 species
GSVIVT01037397001 CYCB1;2, CYC1BAT Cell cycle.regulation.cyclins.CYCB-type cyclin 0.01 OrthoFinder output from all 47 species
Gb_01761 CYCB3;1 cyclin (CYCB) 0.04 OrthoFinder output from all 47 species
Gb_03506 CYCB1;4 cyclin (CYCB) 0.02 OrthoFinder output from all 47 species
Gb_10664 CYCB2;3 cyclin (CYCB) 0.03 OrthoFinder output from all 47 species
Gb_27795 CYCB1;2, CYC1BAT G2/mitotic-specific cyclin-1 OS=Antirrhinum majus... 0.04 OrthoFinder output from all 47 species
LOC_Os01g59120.1 CYCB1;2,... cyclin (CYCB) 0.09 OrthoFinder output from all 47 species
LOC_Os04g47580.1 CYCB2;3, LOC_Os04g47580 cyclin (CYCB) 0.06 OrthoFinder output from all 47 species
LOC_Os05g41390.1 CYCB1;2,... cyclin (CYCB) 0.07 OrthoFinder output from all 47 species
LOC_Os06g51110.2 CYCB2;3, LOC_Os06g51110 cyclin (CYCB) 0.06 OrthoFinder output from all 47 species
Len_g05365 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Len_g56071 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Lfl_g25818 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
MA_10429701g0010 CYCB1;1, CYCB1, CYC1 G2/mitotic-specific cyclin S13-6 OS=Glycine max... 0.03 OrthoFinder output from all 47 species
MA_10433093g0020 CYCB2;3 Cyclin-B2-1 OS=Oryza sativa subsp. indica... 0.03 OrthoFinder output from all 47 species
MA_311439g0010 CYCB1;3, CYC2 cyclin (CYCB) 0.03 OrthoFinder output from all 47 species
Mp2g00590.1 CYCB2;3 cyclin (CYCB) 0.03 OrthoFinder output from all 47 species
Mp5g10030.1 CYCB2;2 cyclin (CYCB) 0.03 OrthoFinder output from all 47 species
Msp_g05360 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Msp_g07854 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Msp_g21114 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Msp_g42899 CYCB2;4 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Nbi_g03000 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Nbi_g39363 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ore_g41900 CYCB2;2 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Pnu_g27503 CYCB2;2 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0210.g025884 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Smo230742 CYCB1;2, CYC1BAT Cell cycle.regulation.cyclins.CYCB-type cyclin 0.03 OrthoFinder output from all 47 species
Solyc01g009040.4.1 CYCB1;2,... cyclin (CYCB) 0.04 OrthoFinder output from all 47 species
Solyc03g032190.3.1 CYCB2;3, Solyc03g032190 cyclin (CYCB) 0.04 OrthoFinder output from all 47 species
Spa_g04211 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Spa_g23146 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Tin_g07321 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Zm00001e007244_P001 CYCB2;3, Zm00001e007244 cyclin (CYCB) 0.04 OrthoFinder output from all 47 species
Zm00001e025467_P001 CYCB1;2,... Cyclin-B1-3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e027336_P001 CYCB1;2,... cyclin (CYCB) 0.03 OrthoFinder output from all 47 species
Zm00001e028899_P002 CYCB1;2,... cyclin (CYCB) 0.04 OrthoFinder output from all 47 species
Zm00001e030146_P001 CYCB2;3, Zm00001e030146 cyclin (CYCB) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 315 427
IPR006671 Cyclin_N 187 312
No external refs found!