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Aliases : Solyc04g081820
Description : La-related protein 1C OS=Arabidopsis thaliana (sp|q94k80|lrp1c_arath : 104.0)
Gene families : OG0000608 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000608_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G21160 | No alias | LA RNA-binding protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g020044 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g087231 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g107381 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g38233 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g02674 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g04484 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26663 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g06975 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene56016.t1 | Aspi01Gene56016 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene62010.t1 | Aspi01Gene62010 | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.29G061100.1 | Ceric.29G061100 | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000498.93 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g19294 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g07929 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01006333001 | No alias | La-related protein 1C OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01037494001 | No alias | RNA processing.RNA decay.deadenylation-dependent... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_04152 | No alias | La-related protein 1C OS=Arabidopsis thaliana... | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g02117 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g07864 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| MA_1763g0010 | No alias | La-related protein 1A OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g15347 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g26140 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g19204 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g44181 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g18023 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g13014 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0087.g018459 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13658 | No alias | XRN4-exoribonuclease cofactor *(LARP1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g27548 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g02549 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e006436_P002 | Zm00001e006436 | La-related protein 1B OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011617_P001 | Zm00001e011617 | La-related protein 1B OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e025537_P001 | Zm00001e025537 | XRN4-exoribonuclease cofactor (LARP1) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006630 | La_HTH | 394 | 442 |
| No external refs found! |