1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g081410.3.1

Solyc04g081410.3.1 (Solyc04g081410)


Aliases : Solyc04g081410

Description : small subunit sigma of AP-2 cargo adaptor complex


Gene families : OG0006811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006811_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g081410.3.1
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Als_g01286 No alias small subunit sigma of AP-2 cargo adaptor complex &... 0.03 OrthoFinder output from all 47 species
Aop_g41486 No alias small subunit sigma of AP-2 cargo adaptor complex &... 0.04 OrthoFinder output from all 47 species
Ceric.12G036900.1 Ceric.12G036900 small subunit sigma of AP-2 cargo adaptor complex &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020780.8 No alias AP-2 complex subunit sigma OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre07.g324600 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 OrthoFinder output from all 47 species
Dac_g01162 No alias small subunit sigma of AP-2 cargo adaptor complex &... 0.04 OrthoFinder output from all 47 species
LOC_Os12g10560.1 LOC_Os12g10560 small subunit sigma of AP-2 cargo adaptor complex 0.04 OrthoFinder output from all 47 species
Ppi_g01569 No alias small subunit sigma of AP-2 cargo adaptor complex &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0133.g022259 No alias small subunit sigma of AP-2 cargo adaptor complex &... 0.03 OrthoFinder output from all 47 species
Tin_g25488 No alias small subunit sigma of AP-2 cargo adaptor complex &... 0.04 OrthoFinder output from all 47 species
Zm00001e011050_P001 Zm00001e011050 small subunit sigma of AP-2 cargo adaptor complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006848 pyruvate transport IEP HCCA
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008154 actin polymerization or depolymerization IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015718 monocarboxylic acid transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030041 actin filament polymerization IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:1901475 pyruvate transmembrane transport IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 1 141
No external refs found!