1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g080960.4.1

Solyc04g080960.4.1 (Solyc04g080960)


Aliases : Solyc04g080960

Description : protease (Papain)


Gene families : OG0001436 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001436_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g080960.4.1

Target Alias Description ECC score Gene Family Method Actions
AT2G21430 No alias Papain family cysteine protease 0.04 OrthoFinder output from all 47 species
AT4G16190 No alias Papain family cysteine protease 0.06 OrthoFinder output from all 47 species
AT4G39090 RD19A, RD19 Papain family cysteine protease 0.06 OrthoFinder output from all 47 species
Ala_g07561 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Als_g00787 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Als_g37038 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Ceric.05G067800.1 RD19A, RD19,... EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Ceric.30G032400.1 Ceric.30G032400 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01009807001 RD19A, RD19 Protein degradation.peptidase families.cysteine-type... 0.04 OrthoFinder output from all 47 species
GSVIVT01009810001 RD19A, RD19 Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01018882001 RD19A, RD19 Protein degradation.peptidase families.cysteine-type... 0.07 OrthoFinder output from all 47 species
Gb_05866 No alias protease (Papain) 0.02 OrthoFinder output from all 47 species
Gb_13610 No alias protease (Papain) 0.07 OrthoFinder output from all 47 species
LOC_Os02g27030.1 RD19A, RD19,... protease (Papain) 0.02 OrthoFinder output from all 47 species
LOC_Os07g29760.1 LOC_Os07g29760 protease (Papain) 0.02 OrthoFinder output from all 47 species
Lfl_g21556 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Msp_g25858 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Pir_g17243 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Sam_g11102 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Sam_g51186 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Solyc11g008260.2.1 Solyc11g008260 protease (Papain) 0.03 OrthoFinder output from all 47 species
Zm00001e014521_P001 RD19A, RD19,... protease (Papain) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR000668 Peptidase_C1A_C 91 313
IPR013201 Prot_inhib_I29 8 64
No external refs found!