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  5. Solyc04g080540.2.1

Solyc04g080540.2.1 (Solyc04g080540)


Aliases : Solyc04g080540

Description : no hits & (original description: none)


Gene families : OG0002456 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002456_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g080540.2.1

Target Alias Description ECC score Gene Family Method Actions
AT1G19530 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
Aev_g01782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25236 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G047100.1 Ceric.16G047100 not classified & original description: pacid=50589453... 0.04 OrthoFinder output from all 47 species
Ceric.16G047200.1 Ceric.16G047200 not classified & original description: pacid=50590114... 0.02 OrthoFinder output from all 47 species
Dde_g02504 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009730001 No alias No description available 0.06 OrthoFinder output from all 47 species
LOC_Os03g61160.1 LOC_Os03g61160 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp6g09190.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g04224 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06494 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g27492 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!