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Aliases : Solyc04g080200
Description : no hits & (original description: none)
Gene families : OG0004380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004380_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc04g080200.4.1 | |
| Cluster | HCCA: Cluster_21 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00013p00248170 | evm_27.TU.AmTr_v1... | No description available | 0.18 | OrthoFinder output from all 47 species | |
| AMTR_s00029p00231350 | evm_27.TU.AmTr_v1... | No description available | 0.14 | OrthoFinder output from all 47 species | |
| AT3G23740 | No alias | unknown protein; FUNCTIONS IN: molecular_function... | 0.12 | OrthoFinder output from all 47 species | |
| Als_g08326 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g21912 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0007.g010787 | No alias | not classified & original description: CDS=18-2243 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0256.g060556 | No alias | not classified & original description: CDS=293-2881 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G010200.1 | Ceric.07G010200 | not classified & original description: pacid=50627972... | 0.13 | OrthoFinder output from all 47 species | |
| Dcu_g18998 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01009690001 | No alias | No description available | 0.14 | OrthoFinder output from all 47 species | |
| GSVIVT01031579001 | No alias | No description available | 0.14 | OrthoFinder output from all 47 species | |
| Gb_19139 | No alias | no hits & (original description: none) | 0.16 | OrthoFinder output from all 47 species | |
| Gb_25851 | No alias | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os01g01170.1 | LOC_Os01g01170 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os03g39740.2 | LOC_Os03g39740 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g16322 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_124485g0010 | No alias | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| MA_45158g0010 | No alias | no hits & (original description: none) | 0.14 | OrthoFinder output from all 47 species | |
| Mp1g04690.1 | No alias | no hits & (original description: none) | 0.14 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0095.g019231 | No alias | not classified & original description: CDS=15-2900 | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e002120_P003 | Zm00001e002120 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e017187_P001 | Zm00001e017187 | no hits & (original description: none) | 0.12 | OrthoFinder output from all 47 species | |
| Zm00001e025613_P002 | Zm00001e025613 | no hits & (original description: none) | 0.13 | OrthoFinder output from all 47 species | |
| Zm00001e039147_P001 | Zm00001e039147 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
| MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | HCCA |
| MF | GO:0003896 | DNA primase activity | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006269 | DNA replication, synthesis of RNA primer | IEP | HCCA |
| BP | GO:0006270 | DNA replication initiation | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0034061 | DNA polymerase activity | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| CC | GO:0042575 | DNA polymerase complex | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043625 | delta DNA polymerase complex | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |