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  5. Solyc04g080120.1.1

Solyc04g080120.1.1 (Solyc04g080120)


Aliases : Solyc04g080120

Description : Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana (sp|q9sxd1|ppr91_arath : 365.0)


Gene families : OG0014096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0014096_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g080120.1.1

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01020691001 No alias Pentatricopeptide repeat-containing protein At5g16640,... 0.07 OrthoFinder output from all 47 species
GSVIVT01036255001 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 228 277
IPR002885 Pentatricopeptide_repeat 369 415
IPR002885 Pentatricopeptide_repeat 295 326
IPR002885 Pentatricopeptide_repeat 505 537
IPR002885 Pentatricopeptide_repeat 329 362
IPR002885 Pentatricopeptide_repeat 547 576
IPR002885 Pentatricopeptide_repeat 196 223
IPR002885 Pentatricopeptide_repeat 160 189
IPR002885 Pentatricopeptide_repeat 441 468
No external refs found!