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  5. Solyc04g080080.3.1

Solyc04g080080.3.1 (Solyc04g080080)


Aliases : Solyc04g080080

Description : arabinosyltransferase (RRA). extensin beta-1,2-arabinosyltransferase


Gene families : OG0003060 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003060_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g080080.3.1

Target Alias Description ECC score Gene Family Method Actions
Cba_g10361 RRA2 beta-1,2-arabinosyltransferase *(RRA) & original... 0.02 OrthoFinder output from all 47 species
Cre06.g288500 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
Lfl_g18521 RRA2 beta-1,2-arabinosyltransferase *(RRA) & original... 0.04 OrthoFinder output from all 47 species
Ore_g17038 RRA2 beta-1,2-arabinosyltransferase *(RRA) & original... 0.02 OrthoFinder output from all 47 species
Pir_g01629 RRA2 beta-1,2-arabinosyltransferase *(RRA) & original... 0.03 OrthoFinder output from all 47 species
Smo103279 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 OrthoFinder output from all 47 species
Spa_g09327 No alias beta-1,2-arabinosyltransferase *(RRA) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR005069 Nucl-diP-sugar_transferase 183 401
No external refs found!