- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : KAN4, ATS, Solyc04g079600
Description : G2-like GARP transcription factor
Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00025p00224230 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.01 | OrthoFinder output from all 47 species | |
| AT1G79430 | APL, WDY | Homeodomain-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G04450 | No alias | Homeodomain-like superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g080178 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g13279 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g18499 | No alias | GARP subgroup PHL transcription factor & original... | 0.08 | OrthoFinder output from all 47 species | |
| Als_g04353 | PHL1 | GARP subgroup PHL transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Als_g09241 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g009521 | No alias | not classified & original description: CDS=1-1092 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g09042 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.22G025700.1 | Ceric.22G025700 | transcription factor *(CLAUSA) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g34786 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g26187 | No alias | GARP subgroup PHL transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g03380 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g14665 | No alias | transcription factor *(CLAUSA) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g22986 | KAN4, ATS | KANADI-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g29468 | No alias | transcription factor *(CLAUSA) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g30049 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01000606001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.1 | OrthoFinder output from all 47 species | |
| GSVIVT01015900001 | APL, WDY | RNA biosynthesis.transcriptional activation.MYB... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01021072001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01029458001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01033515001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_25991 | No alias | G2-like GARP transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Gb_25992 | No alias | G2-like GARP transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| Gb_26822 | PHL1 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Gb_41007 | No alias | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g04640.1 | LOC_Os02g04640 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g07170.1 | LOC_Os02g07170 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g51130.1 | LOC_Os04g51130 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os06g35140.1 | LOC_Os06g35140 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g45890.1 | LOC_Os06g45890 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g06370.1 | KAN2, LOC_Os08g06370 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Len_g09088 | KAN2 | KANADI-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g21596 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g40903 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_120020g0010 | No alias | G2-like GARP transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| MA_218023g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_52379g0010 | No alias | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g02133 | No alias | GARP subgroup PHL transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g15270 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g13957 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0011.g005338 | No alias | GARP subgroup PHL transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g12596 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g18907 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g22183 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo405399 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc10g083340.3.1 | Solyc10g083340 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g085620.2.1 | Solyc10g085620 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g05501 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g16091 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g25153 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g01742 | No alias | GARP subgroup PHL transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g08752 | No alias | transcription factor *(CLAUSA) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e004125_P001 | Zm00001e004125 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011962_P002 | KAN2, Zm00001e011962 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e013626_P001 | Zm00001e013626 | G2-like GARP transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e015514_P001 | KAN2, Zm00001e015514 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e022454_P001 | Zm00001e022454 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e037761_P001 | Zm00001e037761 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001005 | SANT/Myb | 126 | 177 |
| No external refs found! |