Aliases : Solyc04g079150
Description : Pentatricopeptide repeat-containing protein At1g73400, mitochondrial OS=Arabidopsis thaliana (sp|q9fx35|pp117_arath : 650.0)
Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc04g079150.1.1 | |
Cluster | HCCA: Cluster_81 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00119p00029960 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g15010,... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00119p00084460 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g27800,... | 0.03 | OrthoFinder output from all 47 species | |
AT1G80880 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
AT3G16010 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT5G15010 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
Aev_g03187 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g15608 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene64236.t1 | Aspi01Gene64236 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g10252 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g23699 | No alias | group-II intron mitochondrial splicing factor *(MISF68)... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g78360 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g07047 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dac_g27861 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g04707 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g05532 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g09971 | No alias | group-II intron mitochondrial splicing factor *(MISF68)... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g39023 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g06106 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g18713 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g50968 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01002056001 | No alias | Pentatricopeptide repeat-containing protein At5g64320,... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01008815001 | No alias | Pentatricopeptide repeat-containing protein At1g77360,... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01015982001 | No alias | Pentatricopeptide repeat-containing protein At1g80880,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01017111001 | No alias | Pentatricopeptide repeat-containing protein At3g16010... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01017293001 | No alias | Pentatricopeptide repeat-containing protein At1g52640,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01026463001 | No alias | Pentatricopeptide repeat-containing protein At2g13420,... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01027388001 | No alias | Pentatricopeptide repeat-containing protein At1g80550,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_20376 | No alias | group-II intron mitochondrial splicing factor (MISF68) | 0.04 | OrthoFinder output from all 47 species | |
Gb_20750 | No alias | Pentatricopeptide repeat-containing protein At5g64320,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_23459 | No alias | Pentatricopeptide repeat-containing protein At1g77360,... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g05860.1 | LOC_Os01g05860 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os02g52220.1 | LOC_Os02g52220 | Pentatricopeptide repeat-containing protein At1g73400,... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g11020.1 | LOC_Os03g11020 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Len_g19159 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g06707 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_12748g0020 | No alias | Pentatricopeptide repeat-containing protein At1g79540... | 0.03 | OrthoFinder output from all 47 species | |
MA_355286g0010 | No alias | Pentatricopeptide repeat-containing protein At5g15010,... | 0.08 | OrthoFinder output from all 47 species | |
MA_39587g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13420,... | 0.06 | OrthoFinder output from all 47 species | |
MA_455059g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
MA_455059g0020 | No alias | Pentatricopeptide repeat-containing protein At3g62470,... | 0.04 | OrthoFinder output from all 47 species | |
MA_8206159g0010 | No alias | Pentatricopeptide repeat-containing protein At5g15010,... | 0.05 | OrthoFinder output from all 47 species | |
MA_929381g0010 | OTP43 | OTP43 mitochondrial RNA splicing factor | 0.03 | OrthoFinder output from all 47 species | |
Mp4g20290.1 | No alias | Pentatricopeptide repeat-containing protein At3g06920... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g08820 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g08945 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g16371 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g14416 | PPR40 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g17038 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g09961 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e005446_P003 | Zm00001e005446 | group-II intron mitochondrial splicing factor (MISF68) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e006773_P001 | Zm00001e006773 | Pentatricopeptide repeat-containing protein At1g80550,... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e025816_P001 | Zm00001e025816 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e026896_P001 | Zm00001e026896 | Pentatricopeptide repeat-containing protein At3g62470,... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e028873_P001 | Zm00001e028873 | Pentatricopeptide repeat-containing protein At5g15010,... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e036197_P001 | Zm00001e036197 | Pentatricopeptide repeat-containing protein At1g71060,... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
No external refs found! |