Solyc04g078880.3.1 (COR27, Solyc04g078880)


Aliases : COR27, Solyc04g078880

Description : no hits & (original description: none)


Gene families : OG0001328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001328_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g078880.3.1

Target Alias Description ECC score Gene Family Method Actions
AT5G42900 COR27 cold regulated gene 27 0.29 OrthoFinder output from all 47 species
Adi_g019995 No alias night-time repressor *(COR27) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g07190 COR27 night-time repressor *(COR27) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01162 No alias night-time repressor *(COR27) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12090 No alias night-time repressor *(COR27) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.04G100500.1 Ceric.04G100500 night-time repressor *(COR27) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.24G075300.1 Ceric.24G075300 night-time repressor *(COR27) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.26G066600.1 Ceric.26G066600 night-time repressor *(COR27) & original description:... 0.02 OrthoFinder output from all 47 species
Dde_g08363 No alias night-time repressor *(COR27) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03839 No alias night-time repressor *(COR27) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009490001 COR27 No description available 0.11 OrthoFinder output from all 47 species
GSVIVT01024176001 COR27 No description available 0.04 OrthoFinder output from all 47 species
LOC_Os03g08580.1 COR27, LOC_Os03g08580 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Len_g57357 No alias night-time repressor *(COR27) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g09670 No alias night-time repressor *(COR27) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26532 No alias night-time repressor *(COR27) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g11052 No alias night-time repressor *(COR27) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29515 No alias night-time repressor *(COR27) & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g32392 No alias night-time repressor *(COR27) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000619_P002 COR27, Zm00001e000619 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!