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  5. Solyc04g078540.4.1

Solyc04g078540.4.1 (Solyc04g078540)


Aliases : Solyc04g078540

Description : Probable cysteine protease RD21B OS=Arabidopsis thaliana (sp|q9fmh8|rd21b_arath : 545.0) & Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase)(50.3.4 : 349.9)


Gene families : OG0000056 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g078540.4.1

Target Alias Description ECC score Gene Family Method Actions
AT3G49340 No alias Cysteine proteinases superfamily protein 0.05 OrthoFinder output from all 47 species
Aev_g33701 XCP2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Aev_g37857 XCP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Ala_g12318 XCP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ala_g33299 XBCP3 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene62644.t1 Aspi01Gene62644 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.01 OrthoFinder output from all 47 species
Cba_g03848 XCP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.01 OrthoFinder output from all 47 species
Dac_g20224 XCP2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.01 OrthoFinder output from all 47 species
Ehy_g01159 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Ehy_g24932 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01020657001 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
LOC_Os04g12660.1 SAG12, LOC_Os04g12660 Senescence-specific cysteine protease SAG39 OS=Oryza... 0.01 OrthoFinder output from all 47 species
LOC_Os04g13090.1 SAG12, LOC_Os04g13090 protease (Papain) 0.01 OrthoFinder output from all 47 species
LOC_Os04g13140.1 SAG12, LOC_Os04g13140 protease (Papain) 0.02 OrthoFinder output from all 47 species
LOC_Os06g38450.1 SAG12, LOC_Os06g38450 Senescence-specific cysteine protease SAG39 OS=Oryza... 0.01 OrthoFinder output from all 47 species
LOC_Os12g17540.1 SAG12, LOC_Os12g17540 protease (Papain) 0.01 OrthoFinder output from all 47 species
Len_g21822 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Pir_g66730 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Ppi_g06682 SAG12 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000602 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001738 XBCP3 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.01 OrthoFinder output from all 47 species
Sam_g09858 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Sam_g13062 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Sam_g26370 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Sam_g40599 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Solyc04g082710.4.1 XCP1, Solyc04g082710 protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.02 OrthoFinder output from all 47 species
Solyc12g094700.3.1 XCP1, Solyc12g094700 protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.03 OrthoFinder output from all 47 species
Zm00001e030284_P002 Zm00001e030284 Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.17 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000668 Peptidase_C1A_C 143 358
IPR013201 Prot_inhib_I29 55 112
IPR000118 Granulin 392 438
No external refs found!