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  5. Solyc04g078480.3.1

Solyc04g078480.3.1 (Solyc04g078480)


Aliases : Solyc04g078480

Description : Protein DCL, chloroplastic OS=Solanum lycopersicum (sp|q42463|dcl_sollc : 122.0)


Gene families : OG0001145 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001145_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g078480.3.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Aop_g07970 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009433001 No alias Protein DCL homolog, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os08g21700.1 LOC_Os08g21700 Protein DCL, chloroplastic OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Lfl_g19534 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!