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  5. Solyc04g078440.4.1

Solyc04g078440.4.1 (Solyc04g078440)


Aliases : Solyc04g078440

Description : Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana (sp|q8l9j9|caes_arath : 222.0)


Gene families : OG0003676 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003676_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g078440.4.1
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01009427001 No alias Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os03g64050.1 LOC_Os03g64050 Probable carbohydrate esterase At4g34215 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016151 nickel cation binding IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR005181 SASA 44 284
No external refs found!