- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Solyc04g078190
Description : no hits & (original description: none)
Gene families : OG0000666 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000666_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc04g078190.4.1 | |
| Cluster | HCCA: Cluster_86 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00133p00115060 | evm_27.TU.AmTr_v1... | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g063519 | No alias | GTPase effector *(BDR) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g10609 | No alias | GTPase effector *(BDR) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g05740 | No alias | GTPase effector *(BDR) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g03174 | No alias | GTPase effector *(BDR) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.13G005400.1 | Ceric.13G005400 | GTPase effector *(BDR) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g01582 | No alias | GTPase effector *(BDR) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009382001 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g39160.1 | LOC_Os12g39160 | GTPase effector (BDR) | 0.02 | OrthoFinder output from all 47 species | |
| MA_10431995g0010 | No alias | GTPase effector (BDR) | 0.04 | OrthoFinder output from all 47 species | |
| MA_133920g0010 | No alias | GTPase effector (BDR) | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g02758 | No alias | GTPase effector *(BDR) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g12104 | No alias | GTPase effector *(BDR) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05810 | No alias | GTPase effector *(BDR) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0043.g012864 | No alias | GTPase effector *(BDR) & original description: CDS=941-2152 | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e035436_P001 | Zm00001e035436 | GTPase effector (BDR) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
| BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
| BP | GO:0006650 | glycerophospholipid metabolic process | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | HCCA |
| BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
| BP | GO:0046486 | glycerolipid metabolic process | IEP | HCCA |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006873 | DUF620 | 172 | 258 |
| No external refs found! |