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  5. Solyc04g077990.3.1

Solyc04g077990.3.1 (LBD38, Solyc04g077990)


Aliases : LBD38, Solyc04g077990

Description : transcription factor (AS2/LOB)


Gene families : OG0001073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g077990.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00137p00051070 LBD39,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
AMTR_s00137p00087340 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.07 OrthoFinder output from all 47 species
AT1G68510 LBD42 LOB domain-containing protein 42 0.03 OrthoFinder output from all 47 species
AT5G67420 LBD37, ASL39 LOB domain-containing protein 37 0.03 OrthoFinder output from all 47 species
Adi_g086054 LBD38 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g01892 LBD38 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06478 LBD38 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g20695 LBD37, ASL39 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11822 LBD38 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07413 LBD38 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G070700.1 LBD38, Ceric.08G070700 AS2/LOB-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01000141001 LBD38 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 OrthoFinder output from all 47 species
GSVIVT01011896001 LBD42 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 OrthoFinder output from all 47 species
GSVIVT01031035001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.06 OrthoFinder output from all 47 species
Gb_10825 LBD40 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Gb_36943 LBD40 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g20800.1 LOC_Os01g20800 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_70989g0010 LBD40 transcription factor (AS2/LOB) 0.07 OrthoFinder output from all 47 species
MA_75731g0010 LBD40 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Pir_g01919 LBD38 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc05g009320.4.1 LBD41, Solyc05g009320 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Spa_g04493 LBD38 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001981_P001 LBD41, Zm00001e001981 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Zm00001e005129_P001 LBD37, ASL39,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Zm00001e032150_P001 LBD41, Zm00001e032150 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 2 101
No external refs found!