1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g077280.3.1

Solyc04g077280.3.1 (Solyc04g077280)


Aliases : Solyc04g077280

Description : protein kinase (SD-1)


Gene families : OG0003003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003003_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g077280.3.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00043p00231180 RK3, ARK3 Protein modification.phosphorylation.TKL kinase... 0.04 OrthoFinder output from all 47 species
AT1G65790 RK1, ARK1 receptor kinase 1 0.06 OrthoFinder output from all 47 species
AT1G65800 RK2, ARK2 receptor kinase 2 0.04 OrthoFinder output from all 47 species
AT4G21380 RK3, ARK3 receptor kinase 3 0.04 OrthoFinder output from all 47 species
GSVIVT01005707001 RK3, ARK3 Receptor-like serine/threonine-protein kinase SD1-8... 0.03 OrthoFinder output from all 47 species
GSVIVT01006353001 RK3, ARK3 Protein modification.phosphorylation.TKL kinase... 0.05 OrthoFinder output from all 47 species
GSVIVT01014500001 No alias Protein modification.phosphorylation.TKL kinase... 0.03 OrthoFinder output from all 47 species
GSVIVT01014520001 No alias Protein modification.phosphorylation.TKL kinase... 0.04 OrthoFinder output from all 47 species
GSVIVT01014524001 No alias G-type lectin S-receptor-like serine/threonine-protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01014529001 No alias Protein modification.phosphorylation.TKL kinase... 0.03 OrthoFinder output from all 47 species
GSVIVT01014537001 No alias Protein modification.phosphorylation.TKL kinase... 0.04 OrthoFinder output from all 47 species
GSVIVT01014538001 No alias Protein modification.phosphorylation.TKL kinase... 0.05 OrthoFinder output from all 47 species
LOC_Os03g35600.1 RK3, ARK3, LOC_Os03g35600 protein kinase (SD-1) 0.04 OrthoFinder output from all 47 species
Solyc04g077360.3.1 Solyc04g077360 protein kinase (SD-1) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
BP GO:0048544 recognition of pollen IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR000858 S_locus_glycoprot_dom 214 321
IPR001480 Bulb-type_lectin_dom 74 180
IPR003609 Pan_app 343 409
IPR001245 Ser-Thr/Tyr_kinase_cat_dom 493 761
No external refs found!