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  5. Solyc04g076640.3.1

Solyc04g076640.3.1 (Solyc04g076640)


Aliases : Solyc04g076640

Description : no hits & (original description: none)


Gene families : OG0001248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001248_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g076640.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00211650 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00046p00191970 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G09890 No alias Rhamnogalacturonate lyase family protein 0.04 OrthoFinder output from all 47 species
AT4G38030 No alias Rhamnogalacturonate lyase family protein 0.05 OrthoFinder output from all 47 species
Ceric.18G076800.1 Ceric.18G076800 not classified & original description: pacid=50622194... 0.05 OrthoFinder output from all 47 species
GSVIVT01006302001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01012710001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_00786 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_00787 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g44020.2 LOC_Os08g44020 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g03790.1 LOC_Os12g03790 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp7g03130.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g11760.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g076650.2.1 Solyc04g076650 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc11g011280.3.1 Solyc11g011280 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e013992_P006 Zm00001e013992 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR029411 RG-lyase_III 444 633
IPR029413 RG-lyase_II 358 429
IPR010325 Rhamnogal_lyase 6 204
No external refs found!