Aliases : Solyc04g076370
Description : Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidopsis thaliana (sp|q9zuy1|pp173_arath : 447.0)
Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00205450 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g25210,... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00003p00209480 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00010p00256660 | OTP43,... | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00019p00238660 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g20300,... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00022p00121040 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g77360,... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00033p00156340 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g80550,... | 0.07 | OrthoFinder output from all 47 species | |
AMTR_s00078p00045650 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g52640,... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00105p00044870 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g71060,... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00119p00029960 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g15010,... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00119p00084460 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g27800,... | 0.03 | OrthoFinder output from all 47 species | |
AT1G02420 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
AT1G52640 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT3G16010 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.07 | OrthoFinder output from all 47 species | |
AT3G49730 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT3G60050 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
AT3G61360 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT5G15010 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
AT5G18390 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
Aev_g03187 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g08644 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g17218 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g21200 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g02334 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g54972 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g15608 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g10252 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g23699 | No alias | group-II intron mitochondrial splicing factor *(MISF68)... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g78360 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000737.24 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020684.46 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020723.110 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
Dac_g07022 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dac_g07047 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g03049 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g04707 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g05532 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g09971 | No alias | group-II intron mitochondrial splicing factor *(MISF68)... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g39023 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01007280001 | No alias | Pentatricopeptide repeat-containing protein At3g49730... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01008815001 | No alias | Pentatricopeptide repeat-containing protein At1g77360,... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01010329001 | No alias | Pentatricopeptide repeat-containing protein At3g04130,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01015982001 | No alias | Pentatricopeptide repeat-containing protein At1g80880,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01017111001 | No alias | Pentatricopeptide repeat-containing protein At3g16010... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01017293001 | No alias | Pentatricopeptide repeat-containing protein At1g52640,... | 0.08 | OrthoFinder output from all 47 species | |
GSVIVT01022794001 | No alias | Pentatricopeptide repeat-containing protein At1g73400,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01026463001 | No alias | Pentatricopeptide repeat-containing protein At2g13420,... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01027388001 | No alias | Pentatricopeptide repeat-containing protein At1g80550,... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01029740001 | No alias | Pentatricopeptide repeat-containing protein At3g62470,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_04017 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
Gb_05336 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
Gb_06907 | No alias | Pentatricopeptide repeat-containing protein At1g80550,... | 0.08 | OrthoFinder output from all 47 species | |
Gb_10944 | No alias | Pentatricopeptide repeat-containing protein At3g22670,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_11871 | No alias | Pentatricopeptide repeat-containing protein At3g49730... | 0.09 | OrthoFinder output from all 47 species | |
Gb_12874 | No alias | Pentatricopeptide repeat-containing protein At3g61360... | 0.04 | OrthoFinder output from all 47 species | |
Gb_13617 | No alias | Pentatricopeptide repeat-containing protein At1g77360,... | 0.06 | OrthoFinder output from all 47 species | |
Gb_19758 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
Gb_20376 | No alias | group-II intron mitochondrial splicing factor (MISF68) | 0.07 | OrthoFinder output from all 47 species | |
Gb_20750 | No alias | Pentatricopeptide repeat-containing protein At5g64320,... | 0.07 | OrthoFinder output from all 47 species | |
Gb_21593 | No alias | Pentatricopeptide repeat-containing protein At1g71060,... | 0.06 | OrthoFinder output from all 47 species | |
Gb_22860 | No alias | Pentatricopeptide repeat-containing protein At1g77360,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_23459 | No alias | Pentatricopeptide repeat-containing protein At1g77360,... | 0.1 | OrthoFinder output from all 47 species | |
Gb_27355 | No alias | Pentatricopeptide repeat-containing protein At5g11310,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_32987 | No alias | Pentatricopeptide repeat-containing protein At5g18390,... | 0.08 | OrthoFinder output from all 47 species | |
Gb_41835 | No alias | Pentatricopeptide repeat-containing protein At2g13420,... | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os01g05860.1 | LOC_Os01g05860 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os01g60010.1 | LOC_Os01g60010 | Pentatricopeptide repeat-containing protein At5g15010,... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g52220.1 | LOC_Os02g52220 | Pentatricopeptide repeat-containing protein At1g73400,... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g11020.1 | LOC_Os03g11020 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g51840.1 | LOC_Os03g51840 | Pentatricopeptide repeat-containing protein At3g49730... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os05g28720.1 | LOC_Os05g28720 | Pentatricopeptide repeat-containing protein At3g62470,... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os08g17080.1 | LOC_Os08g17080 | Pentatricopeptide repeat-containing protein At1g80880,... | 0.03 | OrthoFinder output from all 47 species | |
Len_g12106 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g14239 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10139g0010 | No alias | Pentatricopeptide repeat-containing protein At3g60050... | 0.03 | OrthoFinder output from all 47 species | |
MA_10432868g0030 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
MA_10433557g0010 | No alias | Pentatricopeptide repeat-containing protein At2g27800,... | 0.05 | OrthoFinder output from all 47 species | |
MA_12748g0020 | No alias | Pentatricopeptide repeat-containing protein At1g79540... | 0.03 | OrthoFinder output from all 47 species | |
MA_128052g0010 | No alias | Pentatricopeptide repeat-containing protein At3g53700,... | 0.06 | OrthoFinder output from all 47 species | |
MA_355286g0010 | No alias | Pentatricopeptide repeat-containing protein At5g15010,... | 0.04 | OrthoFinder output from all 47 species | |
MA_38485g0010 | No alias | Pentatricopeptide repeat-containing protein At1g63080,... | 0.05 | OrthoFinder output from all 47 species | |
MA_387336g0010 | No alias | Pentatricopeptide repeat-containing protein At3g22670,... | 0.03 | OrthoFinder output from all 47 species | |
MA_39587g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13420,... | 0.03 | OrthoFinder output from all 47 species | |
MA_455059g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
MA_8206159g0010 | No alias | Pentatricopeptide repeat-containing protein At5g15010,... | 0.05 | OrthoFinder output from all 47 species | |
MA_845827g0010 | No alias | Pentatricopeptide repeat-containing protein At1g06710,... | 0.06 | OrthoFinder output from all 47 species | |
MA_929381g0010 | OTP43 | OTP43 mitochondrial RNA splicing factor | 0.05 | OrthoFinder output from all 47 species | |
MA_95186g0010 | No alias | Pentatricopeptide repeat-containing protein At1g52640,... | 0.04 | OrthoFinder output from all 47 species | |
Mp1g21650.1 | No alias | Pentatricopeptide repeat-containing protein At3g06920... | 0.02 | OrthoFinder output from all 47 species | |
Mp4g20290.1 | No alias | Pentatricopeptide repeat-containing protein At3g06920... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g08820 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g08945 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g27162 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g03184 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g14416 | PPR40 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g006850.1.1 | Solyc01g006850 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g116540.1.1 | Solyc03g116540 | Pentatricopeptide repeat-containing protein At1g52640,... | 0.06 | OrthoFinder output from all 47 species | |
Solyc03g117570.3.1 | Solyc03g117570 | Pentatricopeptide repeat-containing protein At1g80880,... | 0.06 | OrthoFinder output from all 47 species | |
Solyc09g082390.3.1 | Solyc09g082390 | Pentatricopeptide repeat-containing protein At3g22670,... | 0.06 | OrthoFinder output from all 47 species | |
Solyc09g097840.2.1 | Solyc09g097840 | Pentatricopeptide repeat-containing protein At5g18390,... | 0.07 | OrthoFinder output from all 47 species | |
Solyc12g043100.2.1 | Solyc12g043100 | group-II intron mitochondrial splicing factor (MISF68) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e005446_P003 | Zm00001e005446 | group-II intron mitochondrial splicing factor (MISF68) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e006773_P001 | Zm00001e006773 | Pentatricopeptide repeat-containing protein At1g80550,... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e013118_P001 | Zm00001e013118 | Pentatricopeptide repeat-containing protein At3g61360... | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e025816_P001 | Zm00001e025816 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e026896_P001 | Zm00001e026896 | Pentatricopeptide repeat-containing protein At3g62470,... | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e028873_P001 | Zm00001e028873 | Pentatricopeptide repeat-containing protein At5g15010,... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e036197_P001 | Zm00001e036197 | Pentatricopeptide repeat-containing protein At1g71060,... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0003697 | single-stranded DNA binding | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
BP | GO:0050896 | response to stimulus | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No external refs found! |