Solyc04g076210.3.1 (UBP16, Solyc04g076210)

Aliases : UBP16, Solyc04g076210

Description : deubiquitinase (UBP15-21)

Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g076210.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00135p00021060	UBP16,...	Protein degradation.peptidase families.cysteine-type...	0.03	OrthoFinder output from all 47 species
AT1G17110	UBP15	ubiquitin-specific protease 15	0.03	OrthoFinder output from all 47 species
AT3G14400	UBP25	ubiquitin-specific protease 25	0.03	OrthoFinder output from all 47 species
Adi_g007364	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g013897	UBP25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g013898	UBP25	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g060737	UBP23	deubiquitinase *(UBP23) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g08916	UBP23	deubiquitinase *(UBP23) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g14073	UBP23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g18505	UBP23	deubiquitinase *(UBP23) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g19936	UBP25	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g04917	UBP25	deubiquitinase *(UBP25) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.22G015900.1	UBP25, Ceric.22G015900	not classified & original description: pacid=50613832...	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000808.46	DRP3B	Protein degradation.peptidase families.cysteine-type...	0.02	OrthoFinder output from all 47 species
Dcu_g03145	UBP18	deubiquitinase *(UBP15-21) & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g08851	UBP23	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g09670	UBP25	deubiquitinase *(UBP25) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g26398	UBP23	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g08414	UBP25	deubiquitinase *(UBP25) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g07912	UBP23	deubiquitinase *(UBP23) & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01033166001	UBP18	Protein degradation.peptidase families.cysteine-type...	0.03	OrthoFinder output from all 47 species
LOC_Os02g46650.1	UBP21, LOC_Os02g46650	Ubiquitin carboxyl-terminal hydrolase 21 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os05g43480.1	UBP25, LOC_Os05g43480	deubiquitinase (UBP25)	0.04	OrthoFinder output from all 47 species
LOC_Os06g44380.1	UBP19, LOC_Os06g44380	deubiquitinase (UBP15-21)	0.08	OrthoFinder output from all 47 species
LOC_Os09g28940.1	UBP17, LOC_Os09g28940	deubiquitinase (UBP15-21)	0.04	OrthoFinder output from all 47 species
Len_g01378	UBP25	deubiquitinase *(UBP25) & original description: none	0.02	OrthoFinder output from all 47 species
Len_g45877	UBP23	deubiquitinase *(UBP23) & original description: none	0.05	OrthoFinder output from all 47 species
Lfl_g09709	UBP18	deubiquitinase *(UBP15-21) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g11163	UBP25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_127079g0010	UBP25	Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_53569g0010	UBP23	deubiquitinase (UBP23)	0.03	OrthoFinder output from all 47 species
Mp2g05560.1	UBP18	deubiquitinase (UBP15-21)	0.07	OrthoFinder output from all 47 species
Nbi_g04872	UBP23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g09620	UBP18	deubiquitinase *(UBP15-21) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g27850	UBP23	deubiquitinase *(UBP23) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g01994	UBP23	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g05280	UBP25	deubiquitinase *(UBP25) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g15722	UBP19	deubiquitinase *(UBP15-21) & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g20105	UBP19	deubiquitinase *(UBP15-21) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g08769	UBP25	deubiquitinase *(UBP25) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0182.g024898	UBP23	not classified & original description: CDS=166-2922	0.02	OrthoFinder output from all 47 species
Sam_g04367	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g26124	UBP23	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g01115	UBP23	deubiquiTinase *(UBP23) & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e022516_P001	UBP17, Zm00001e022516	deubiquitinase (UBP15-21)	0.07	OrthoFinder output from all 47 species
Zm00001e024878_P003	UBP15, Zm00001e024878	deubiquitinase (UBP15-21)	0.03	OrthoFinder output from all 47 species
Zm00001e027381_P003	UBP25, Zm00001e027381	deubiquitinase (UBP25)	0.03	OrthoFinder output from all 47 species
Zm00001e030428_P001	UBP19, Zm00001e030428	deubiquitinase (UBP15-21)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
MF	GO:0101005	deubiquitinase activity	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	575	877
IPR002893	Znf_MYND	55	92

External Links

No external refs found!

Solyc04g076210.3.1 (UBP16, Solyc04g076210)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation