1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g074930.4.1

Solyc04g074930.4.1 (Solyc04g074930)


Aliases : Solyc04g074930

Description : no hits & (original description: none)


Gene families : OG0003821 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003821_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g074930.4.1

Target Alias Description ECC score Gene Family Method Actions
AT4G33590 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.06 OrthoFinder output from all 47 species
AT4G33600 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Aev_g39564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.21G025700.1 Ceric.21G025700 not classified & original description: pacid=50603867... 0.05 OrthoFinder output from all 47 species
Ceric.26G020200.1 Ceric.26G020200 not classified & original description: pacid=50599469... 0.03 OrthoFinder output from all 47 species
Ehy_g17382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012504001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01023306001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os09g29160.1 LOC_Os09g29160 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Len_g53840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_100671g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10433724g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10435651g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_99337g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9960041g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Nbi_g07707 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12476 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g28330 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007657 Glycosyltransferase_61 174 399
No external refs found!