Solyc04g074910.3.1 (Solyc04g074910)


Aliases : Solyc04g074910

Description : component RPS21 of SSU proteome


Gene families : OG0004049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004049_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g074910.3.1
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00200410 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
AT3G53890 No alias Ribosomal protein S21e 0.1 OrthoFinder output from all 47 species
AT5G27700 No alias Ribosomal protein S21e 0.15 OrthoFinder output from all 47 species
Aop_g23096 No alias component *(eS21) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s2932.g113764 No alias component *(eS21) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Ceric.37G056600.1 Ceric.37G056600 component *(eS21) of small ribosomal-subunit (SSU)... 0.12 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020780.14 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
Cre03.g203450 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.15 OrthoFinder output from all 47 species
Dcu_g13598 No alias component *(eS21) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Dcu_g44956 No alias component *(eS21) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01017756001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.17 OrthoFinder output from all 47 species
GSVIVT01031151001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.15 OrthoFinder output from all 47 species
Gb_27652 No alias component RPS21 of SSU proteome 0.13 OrthoFinder output from all 47 species
Gb_35516 No alias component RPS21 of SSU proteome 0.16 OrthoFinder output from all 47 species
LOC_Os03g46490.1 LOC_Os03g46490 component RPS21 of SSU proteome 0.09 OrthoFinder output from all 47 species
MA_73657g0010 No alias component RPS21 of SSU proteome 0.04 OrthoFinder output from all 47 species
Mp4g22150.1 No alias component RPS21 of SSU proteome 0.14 OrthoFinder output from all 47 species
Ore_g24223 No alias component *(eS21) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pp3c24_8160V3.1 Pp3c24_8160 Ribosomal protein S21e 0.05 OrthoFinder output from all 47 species
Pp3c26_3000V3.1 Pp3c26_3000 Ribosomal protein S21e 0.09 OrthoFinder output from all 47 species
Ppi_g15790 No alias component *(eS21) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g07802 No alias component *(eS21) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Sam_g07803 No alias component *(eS21) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Smo271040 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 OrthoFinder output from all 47 species
Zm00001e001637_P002 Zm00001e001637 component RPS21 of SSU proteome 0.12 OrthoFinder output from all 47 species
Zm00001e011684_P002 Zm00001e011684 component RPS21 of SSU proteome 0.12 OrthoFinder output from all 47 species
Zm00001e031393_P002 Zm00001e031393 component RPS21 of SSU proteome 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001931 Ribosomal_S21e 1 76
No external refs found!