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  5. Solyc04g074680.1.1

Solyc04g074680.1.1 (Solyc04g074680)


Aliases : Solyc04g074680

Description : no hits & (original description: none)


Gene families : OG0011601 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011601_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g074680.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00222650 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT1G22470 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.1 OrthoFinder output from all 47 species
AT1G35210 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.1 OrthoFinder output from all 47 species
AT1G72240 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
AT5G65300 No alias unknown protein; Has 30201 Blast hits to 17322 proteins... 0.07 OrthoFinder output from all 47 species
Aop_g41568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009081001 No alias No description available 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR008004 OCTOPUS-like 24 94
No external refs found!