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  5. Solyc04g074220.4.1

Solyc04g074220.4.1 (Solyc04g074220)


Aliases : Solyc04g074220

Description : no hits & (original description: none)


Gene families : OG0000572 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000572_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g074220.4.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g105661 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g02683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g13950 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g15545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g08100.1 LOC_Os03g08100 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_939638g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g09100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo79445 No alias No description available 0.06 OrthoFinder output from all 47 species
Solyc02g085180.5.1.1 Solyc02g085180 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Solyc08g061240.3.1 Solyc08g061240 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 3 227
No external refs found!