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  5. Solyc04g072690.3.1

Solyc04g072690.3.1 (Solyc04g072690)


Aliases : Solyc04g072690

Description : pepsin-type protease


Gene families : OG0002524 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002524_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g072690.3.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g14028 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06174 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01981 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008978001 No alias Protein degradation.peptidase families.aspartic-type... 0.04 OrthoFinder output from all 47 species
LOC_Os02g51540.1 LOC_Os02g51540 pepsin-type protease 0.04 OrthoFinder output from all 47 species
Pir_g41188 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023878_P004 Zm00001e023878 pepsin-type protease 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032861 TAXi_N 104 286
IPR032799 TAXi_C 325 446
No external refs found!