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Aliases : Solyc04g072670
Description : component ACINUS of RNA quality control Exon Junction complex
Gene families : OG0001433 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001433_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00217580 | evm_27.TU.AmTr_v1... | RNA processing.RNA quality control Exon Junction complex... | 0.02 | OrthoFinder output from all 47 species | |
| AT4G39680 | No alias | SAP domain-containing protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g017411 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g046286 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g16232 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g12459 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g27768 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g39202 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g07390 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g14212 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g39106 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g39107 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g11157 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g09840 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g39092 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g42746 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g12307 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g19978 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01008977001 | No alias | RNA processing.RNA quality control Exon Junction complex... | 0.1 | OrthoFinder output from all 47 species | |
| GSVIVT01022190001 | No alias | RNA processing.RNA quality control Exon Junction complex... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g26630.1 | LOC_Os03g26630 | component ACINUS of RNA quality control Exon Junction complex | 0.03 | OrthoFinder output from all 47 species | |
| Len_g24712 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g34375 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.05 | OrthoFinder output from all 47 species | |
| MA_7197g0010 | No alias | component ACINUS of RNA quality control Exon Junction complex | 0.06 | OrthoFinder output from all 47 species | |
| Mp2g15000.1 | No alias | component ACINUS of RNA quality control Exon Junction complex | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g09348 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g24204 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g57721 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g42834 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.05 | OrthoFinder output from all 47 species | |
| Smo442865 | No alias | RNA processing.RNA quality control Exon Junction complex... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g08782 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g05227 | No alias | component *(ACINUS) of RNA quality control Exon Junction... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e001848_P001 | Zm00001e001848 | component ACINUS of RNA quality control Exon Junction complex | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e037964_P002 | Zm00001e037964 | component ACINUS of RNA quality control Exon Junction complex | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004484 | mRNA guanylyltransferase activity | IEP | HCCA |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006370 | 7-methylguanosine mRNA capping | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | HCCA |
| MF | GO:0008192 | RNA guanylyltransferase activity | IEP | HCCA |
| BP | GO:0009452 | 7-methylguanosine RNA capping | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0016311 | dephosphorylation | IEP | HCCA |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0036260 | RNA capping | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| MF | GO:0070568 | guanylyltransferase activity | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0106413 | dihydrouridine synthase activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| No external refs found! |