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  5. Solyc04g072630.4.1

Solyc04g072630.4.1 (Solyc04g072630)


Aliases : Solyc04g072630

Description : no hits & (original description: none)


Gene families : OG0000964 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000964_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g072630.4.1
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00223040 evm_27.TU.AmTr_v1... COP1-interactive protein 1 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AT5G41140 No alias Myosin heavy chain-related protein 0.05 OrthoFinder output from all 47 species
AT5G52280 No alias Myosin heavy chain-related protein 0.04 OrthoFinder output from all 47 species
Aev_g19712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16051 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26120 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27313 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g33047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012083 No alias not classified & original description: CDS=678-3254 0.02 OrthoFinder output from all 47 species
Azfi_s0015.g014174 No alias not classified & original description: CDS=345-4727 0.02 OrthoFinder output from all 47 species
Azfi_s0028.g023862 No alias not classified & original description: CDS=554-2527 0.01 OrthoFinder output from all 47 species
Cba_g05334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08669 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008970001 No alias No description available 0.12 OrthoFinder output from all 47 species
GSVIVT01008971001 No alias No description available 0.12 OrthoFinder output from all 47 species
GSVIVT01016161001 No alias WEB family protein At4g27595, chloroplastic... 0.03 OrthoFinder output from all 47 species
GSVIVT01028978001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_04458 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_26931 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_27516 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g01710.1 LOC_Os03g01710 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os10g21940.1 LOC_Os10g21940 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
LOC_Os10g36060.1 LOC_Os10g36060 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Len_g08370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10437003g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9751268g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g38210 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g06501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo425588 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Tin_g20328 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004411_P002 Zm00001e004411 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e018560_P002 Zm00001e018560 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 11 140
No external refs found!