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  5. Solyc04g072040.1.1

Solyc04g072040.1.1 (Solyc04g072040)


Aliases : Solyc04g072040

Description : no hits & (original description: none)


Gene families : OG0009630 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009630_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g072040.1.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0001.g000483 No alias not classified & original description: CDS=89-1318 0.02 OrthoFinder output from all 47 species
Ceric.14G018100.1 Ceric.14G018100 not classified & original description: pacid=50633961... 0.09 OrthoFinder output from all 47 species
GSVIVT01013700001 No alias No description available 0.12 OrthoFinder output from all 47 species
Gb_35093 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g07534 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_20408g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g02290.1 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR032739 MRNIP 8 84
No external refs found!