Solyc04g071300.3.1 (ATPA, Solyc04g071300)

Aliases : ATPA, Solyc04g071300

Description : ATP synthase subunit alpha, chloroplastic OS=Cucumis sativus (sp|q2qda3|atpa_cucsa : 139.0)

Gene families : OG0001376 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001376_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g071300.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00085p00076150	ATPA	ATP synthase subunit alpha, chloroplastic OS=Amborella trichopoda	0.01	OrthoFinder output from all 47 species
AMTR_s00390p00012050	ATPA	Photosynthesis.photophosphorylation.ATP synthase...	0.01	OrthoFinder output from all 47 species
ATCG00120	ATPA	ATP synthase subunit alpha	0.01	OrthoFinder output from all 47 species
Aev_g01324	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.02	OrthoFinder output from all 47 species
Als_g15224	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.02	OrthoFinder output from all 47 species
Ceric.01G056900.1	ATPA, Ceric.01G056900	not classified & original description: pacid=50591476...	0.02	OrthoFinder output from all 47 species
Ceric.03G088300.1	ATP1, Ceric.03G088300	not classified & original description: pacid=50573201...	0.02	OrthoFinder output from all 47 species
Ceric.1Z240900.1	ATP1, Ceric.1Z240900	subunit alpha of ATP synthase peripheral MF1 subcomplex...	0.03	OrthoFinder output from all 47 species
Ceric.29G005400.1	ATPA, Ceric.29G005400	not classified & original description: pacid=50625214...	0.02	OrthoFinder output from all 47 species
Ceric.38G027200.1	ATP1, Ceric.38G027200	not classified & original description: pacid=50579504...	0.03	OrthoFinder output from all 47 species
Ceric.38G027500.1	ATP1, Ceric.38G027500	subunit alpha of ATP synthase peripheral MF1 subcomplex...	0.03	OrthoFinder output from all 47 species
GSVIVT01002448001	ATP1	ATP synthase subunit alpha, mitochondrial OS=Helianthus annuus	0.01	OrthoFinder output from all 47 species
Gb_23670	No alias	ATP synthase subunit alpha, mitochondrial OS=Marchantia...	0.01	OrthoFinder output from all 47 species
LOC_Os04g16740.1	ATPA, LOC_Os04g16740	subunit alpha of peripheral CF1 subcomplex of ATP...	0.02	OrthoFinder output from all 47 species
LOC_Os09g08880.1	ATPA, LOC_Os09g08880	ATP synthase subunit alpha, chloroplastic OS=Oryza...	0.02	OrthoFinder output from all 47 species
LOC_Os10g21240.1	ATPA, LOC_Os10g21240	subunit alpha of peripheral CF1 subcomplex of ATP...	0.03	OrthoFinder output from all 47 species
Ore_g20650	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003503	ATPA	not classified & original description: CDS=1-624	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s2240.g028298	ATPA	not classified & original description: CDS=1-471	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s2240.g028299	ATPA	not classified & original description: CDS=1-399	0.01	OrthoFinder output from all 47 species
Smo137834	ATPA	Photosynthesis.photophosphorylation.ATP synthase...	0.03	OrthoFinder output from all 47 species
Solyc00g500050.1.1	ATPA, Solyc00g500050	subunit alpha of peripheral CF1 subcomplex of ATP...	0.02	OrthoFinder output from all 47 species
Solyc00g500133.1.1	ATPA, Solyc00g500133	subunit alpha of peripheral CF1 subcomplex of ATP...	0.02	OrthoFinder output from all 47 species
Solyc00g500203.1.1	ATPA, Solyc00g500203	subunit alpha of peripheral CF1 subcomplex of ATP...	0.02	OrthoFinder output from all 47 species
Solyc00g500292.1.1	ATPA, Solyc00g500292	subunit alpha of peripheral CF1 subcomplex of ATP...	0.02	OrthoFinder output from all 47 species
Solyc00g500323.1.1	ATPA, Solyc00g500323	subunit alpha of peripheral CF1 subcomplex of ATP...	0.02	OrthoFinder output from all 47 species
Solyc00g500332.1.1	ATPA, Solyc00g500332	subunit alpha of peripheral CF1 subcomplex of ATP...	0.02	OrthoFinder output from all 47 species
Solyc00g500345.1.1	ATP1, Solyc00g500345	subunit alpha of ATP synthase peripheral MF1 subcomplex	0.03	OrthoFinder output from all 47 species
Solyc00g500358.1.1	ATP1, Solyc00g500358	subunit alpha of ATP synthase peripheral MF1 subcomplex	0.02	OrthoFinder output from all 47 species
Zm00001e042115_P001	ATP1, Zm00001e042115	subunit alpha of ATP synthase peripheral MF1 subcomplex	0.02	OrthoFinder output from all 47 species
Zm00001e042503_P001	ATP1, Zm00001e042503	subunit alpha of ATP synthase peripheral MF1 subcomplex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0034220	monoatomic ion transmembrane transport	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046034	ATP metabolic process	IEA	Interproscan
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0098655	monoatomic cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1902600	proton transmembrane transport	IEA	Interproscan

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004100	ATPase_F1/V1/A1_a/bsu_N	1	45

External Links

No external refs found!

Solyc04g071300.3.1 (ATPA, Solyc04g071300)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation