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  5. Solyc04g064670.3.1

Solyc04g064670.3.1 (Solyc04g064670)


Aliases : Solyc04g064670

Description : PsbP domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana (sp|o49292|ppd4_arath : 341.0)


Gene families : OG0006741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006741_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g064670.3.1
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00078260 evm_27.TU.AmTr_v1... PsbP domain-containing protein 4, chloroplastic... 0.03 OrthoFinder output from all 47 species
AT1G77090 No alias Mog1/PsbP/DUF1795-like photosystem II reaction center... 0.07 OrthoFinder output from all 47 species
Aev_g31777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57621.t1 Aspi01Gene57621 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G021700.1 Ceric.35G021700 not classified & original description: pacid=50580848... 0.04 OrthoFinder output from all 47 species
Dac_g00401 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os12g08830.1 LOC_Os12g08830 PsbP domain-containing protein 4, chloroplastic... 0.08 OrthoFinder output from all 47 species
Len_g04660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g35597 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Mp1g26600.1 No alias PsbP domain-containing protein 4, chloroplastic... 0.03 OrthoFinder output from all 47 species
Nbi_g00531 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26017 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g05874 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19157 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002683 PsbP_C 132 275
No external refs found!