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  5. Solyc04g054529.1.1

Solyc04g054529.1.1 (CRK8, Solyc04g054529)


Aliases : CRK8, Solyc04g054529

Description : Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana (sp|q9zt94|polr2_arath : 111.0)


Gene families : OG0000741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000741_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g054529.1.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Solyc01g014963.1.1 CRK8, Solyc01g014963 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc02g068295.1.1 CRK8, Solyc02g068295 Retrovirus-related Pol polyprotein from transposon RE2... 0.05 OrthoFinder output from all 47 species
Solyc07g019625.1.1 CRK8, Solyc07g019625 Retrovirus-related Pol polyprotein from transposon RE2... 0.07 OrthoFinder output from all 47 species
Solyc10g076565.1.1 CRK8, Solyc10g076565 Retrovirus-related Pol polyprotein from transposon RE2... 0.04 OrthoFinder output from all 47 species
Solyc12g042215.1.1 CRK8, Solyc12g042215 Retrovirus-related Pol polyprotein from transposon RE1... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA

No InterPro domains available for this sequence

No external refs found!