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  5. Solyc04g054400.3.1

Solyc04g054400.3.1 (Solyc04g054400)


Aliases : Solyc04g054400

Description : 11-beta-hydroxysteroid dehydrogenase-like 4A OS=Arabidopsis thaliana (sp|p0dkc7|hsd4a_arath : 89.4)


Gene families : OG0001150 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001150_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g054400.3.1
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01007169001 No alias 3-oxoacyl-[acyl-carrier-protein] reductase,... 0.01 OrthoFinder output from all 47 species
Ppi_g59931 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo266637 No alias 3-oxoacyl-[acyl-carrier-protein] reductase,... 0.02 OrthoFinder output from all 47 species
Tin_g28086 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0042255 ribosome assembly IEP HCCA
BP GO:0042256 cytosolic ribosome assembly IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 7 188
No external refs found!