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  5. Solyc04g054370.1.1

Solyc04g054370.1.1 (BRH1, Solyc04g054370)


Aliases : BRH1, Solyc04g054370

Description : no hits & (original description: none)


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g054370.1.1

Target Alias Description ECC score Gene Family Method Actions
AT1G72220 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g045665 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Adi_g088636 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aev_g04830 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g57614 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g03042 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene49237.t1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Azfi_s0099.g044133 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Ceric.25G002800.1 Ceric.25G002800 not classified & original description: pacid=50594229... 0.02 OrthoFinder output from all 47 species
Ceric.30G049300.1 Ceric.30G049300 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dac_g04583 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.09 OrthoFinder output from all 47 species
Dac_g31595 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12448 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g11988 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g23056 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g24499 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Ehy_g27968 ATL4H RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
GSVIVT01015682001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01027524001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Gb_14777 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os12g24490.1 LOC_Os12g24490 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Len_g18865 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
MA_114175g0010 ATL2, TL2 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Nbi_g03406 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.07 OrthoFinder output from all 47 species
Ore_g10421 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g43484 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Pir_g09945 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20219 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Ppi_g26079 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.09 OrthoFinder output from all 47 species
Ppi_g43947 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc01g109820.1.1 Solyc01g109820 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc02g085270.1.1 Solyc02g085270 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Spa_g03237 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g06983 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g10665 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g29391 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08277 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.02 OrthoFinder output from all 47 species
Zm00001e007129_P001 Zm00001e007129 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Zm00001e007956_P001 ATRING1, RING1,... RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Zm00001e009142_P001 Zm00001e009142 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e017960_P001 RHA3A, Zm00001e017960 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e023515_P001 Zm00001e023515 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Zm00001e034829_P001 RHA3A, Zm00001e034829 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e035560_P001 ATL3, Zm00001e035560 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Zm00001e041385_P001 Zm00001e041385 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 76 120
No external refs found!