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  5. Solyc04g054330.3.1

Solyc04g054330.3.1 (Solyc04g054330)


Aliases : Solyc04g054330

Description : no hits & (original description: none)


Gene families : OG0001516 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001516_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc04g054330.3.1

Target Alias Description ECC score Gene Family Method Actions
Cba_g00674 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g29642 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00641 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009539 No alias E3 ubiquitin ligase & original description: CDS=89-1339 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011164 No alias E3 ubiquitin ligase & original description: CDS=49-897 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 36 83
No external refs found!