1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g051870.3.1

Solyc04g051870.3.1 (SKIP6, Solyc04g051870)


Aliases : SKIP6, Solyc04g051870

Description : F-box/kelch-repeat protein SKIP6 OS=Arabidopsis thaliana (sp|q9sj04|skip6_arath : 387.0)


Gene families : OG0000469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g051870.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00211260 evm_27.TU.AmTr_v1... F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aev_g05853 No alias substrate adaptor *(SKIP30) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Azfi_s0092.g043100 SKIP6 substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Dcu_g05397 SKIP6 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.04 OrthoFinder output from all 47 species
Len_g21858 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Lfl_g38592 SKIP6 substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ore_g04015 SKIP6 substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Spa_g00406 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e013448_P001 SKIP4, Zm00001e013448 F-box/kelch-repeat protein SKIP4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 106 148
IPR006652 Kelch_1 153 196
IPR001810 F-box_dom 11 53
No external refs found!