Solyc04g051800.3.1 (ATGCN5, GCN5, Solyc04g051800)

Aliases : ATGCN5, GCN5, Solyc04g051800

Description : ABC transporter F family member 5 OS=Arabidopsis thaliana (sp|q9lv93|ab5f_arath : 910.0)

Gene families : OG0003045 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003045_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g051800.3.1
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00247660	ATGCN5, GCN5,...	ABC transporter F family member 5 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
AT5G64840	ATGCN5, GCN5	general control non-repressible 5	0.2	OrthoFinder output from all 47 species
Adi_g057121	ATGCN5, GCN5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g12591	ATGCN5, GCN5	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g04195	ATGCN5, GCN5	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Als_g16234	ATGCN5, GCN5	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g07329	ATGCN5, GCN5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene62480.t1	ATGCN5, GCN5,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0168.g054635	ATGCN5, GCN5	not classified & original description: CDS=239-2245	0.13	OrthoFinder output from all 47 species
Cba_g38272	ATGCN5, GCN5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.29G008900.1	ATGCN5, GCN5,...	not classified & original description: pacid=50624672...	0.11	OrthoFinder output from all 47 species
Cre08.g372250	ATGCN5, GCN5	ABC transporter F family member 5 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
Dac_g12683	ATGCN5, GCN5	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g28626	ATGCN5, GCN5	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g07651	ATGCN5, GCN5	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01022235001	ATGCN5, GCN5	ABC transporter F family member 5 OS=Arabidopsis thaliana	0.08	OrthoFinder output from all 47 species
Gb_01082	ATGCN5, GCN5	ABC transporter F family member 5 OS=Arabidopsis...	0.07	OrthoFinder output from all 47 species
Gb_01083	ATGCN5, GCN5	ABC transporter F family member 5 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os11g39020.1	ATGCN5, GCN5,...	ABC transporter F family member 5 OS=Arabidopsis...	0.11	OrthoFinder output from all 47 species
Len_g13114	ATGCN5, GCN5	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g07903	ATGCN5, GCN5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_10437027g0010	ATGCN5, GCN5	ABC transporter F family member 5 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Mp7g11090.1	ATGCN5, GCN5	ABC transporter F family member 5 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Msp_g14610	ATGCN5, GCN5	not classified & original description: none	0.1	OrthoFinder output from all 47 species
Nbi_g11528	ATGCN5, GCN5	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Pir_g09728	ATGCN5, GCN5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g11340	ATGCN5, GCN5	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g15434	ATGCN5, GCN5	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g19383	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g18685	ATGCN5, GCN5	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g11682	ATGCN5, GCN5	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Zm00001e011297_P001	ATGCN5, GCN5,...	ABC transporter F family member 5 OS=Arabidopsis...	0.14	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016851	magnesium chelatase activity	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
MF	GO:0051002	ligase activity, forming nitrogen-metal bonds	IEP	HCCA
MF	GO:0051003	ligase activity, forming nitrogen-metal bonds, forming coordination complexes	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
MF	GO:0071949	FAD binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032781	ABC_tran_Xtn	330	417
IPR003439	ABC_transporter-like_ATP-bd	444	575
IPR003439	ABC_transporter-like_ATP-bd	116	291

External Links

No external refs found!

Solyc04g051800.3.1 (ATGCN5, GCN5, Solyc04g051800)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation