Solyc04g051680.4.1 (ATRABG3B, RABG3B,...)

Aliases : ATRABG3B, RABG3B, RAB75, RAB7, Solyc04g051680

Description : G-class RAB GTPase

Gene families : OG0000865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000865_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g051680.4.1

Target	Alias	Description	ECC score	Gene Family Method
AT5G39620	AtRABG1, RABG1	RAB GTPase homolog G1	0.03	OrthoFinder output from all 47 species
Aspi01Gene23103.t1	ATRABG3C,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.03G072800.1	AtRABG3d,...	G-class RAB GTPase & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g22987	ATRABG3B,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g27800	ATRABG2, ATRAB7A, RAB7A	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g29482	AtRABG3d, RABG3d	G-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
MA_301871g0010	ATRABG3C, ATRAB7D, RABG3c	Ras-related protein Rab7 OS=Prunus armeniaca...	0.03	OrthoFinder output from all 47 species
MA_485625g0010	ATRABG3B,...	G-class RAB GTPase	0.03	OrthoFinder output from all 47 species
Pir_g64639	ATRABG2, ATRAB7A, RAB7A	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g19659	No alias	G-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g23375	ATRABG2, ATRAB7A, RAB7A	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	10	174

External Links

No external refs found!