Solyc04g050990.3.1 (MEE66, Solyc04g050990)


Aliases : MEE66, Solyc04g050990

Description : F-box protein At2g02240 OS=Arabidopsis thaliana (sp|q3e6p4|fb95_arath : 247.0)


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g050990.3.1

Target Alias Description ECC score Gene Family Method Actions
AT4G19840 PP2-A1,... phloem protein 2-A1 0.03 OrthoFinder output from all 47 species
AT4G19850 ATPP2-A2, PP2-A2, PP2A2 lectin-related 0.04 OrthoFinder output from all 47 species
Ceric.04G053200.1 Ceric.04G053200 not classified & original description: pacid=50630254... 0.03 OrthoFinder output from all 47 species
Dde_g18479 MEE66 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g56800.1 AtPP2-B2,... Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g56810.1 AtPP2-B2,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g02550.1 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
LOC_Os12g03740.1 AtPP2-B10,... F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc03g026160.4.1 AtPP2-A13,... F-box protein PP2-A13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g098190.2.1 AtPP2-B10,... F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e041427_P001 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025886 PP2-like 105 295
No external refs found!