1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g049670.4.1

Solyc04g049670.4.1 (APRR7, PRR7, Solyc04g049670)


Aliases : APRR7, PRR7, Solyc04g049670

Description : PRR circadian clock time-of-day-dependent expressed repressor


Gene families : OG0001140 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001140_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g049670.4.1

Target Alias Description ECC score Gene Family Method Actions
AT5G60100 PRR3, APRR3 pseudo-response regulator 3 0.03 OrthoFinder output from all 47 species
Adi_g107970 APRR7, PRR7 circAdian clock time-of-day-dependent expressed... 0.03 OrthoFinder output from all 47 species
Aob_g12531 APRR7, PRR7 circadian clock time-of-day-dependent expressed... 0.03 OrthoFinder output from all 47 species
Ehy_g08653 APRR7, PRR7 circadian clock time-of-day-dependent expressed... 0.02 OrthoFinder output from all 47 species
Len_g37809 APRR7, PRR7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54722 APRR7, PRR7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo16699 APRR7, PRR7 Two-component response regulator-like APRR7... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004749 ribose phosphate diphosphokinase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010402 CCT_domain 616 658
IPR001789 Sig_transdc_resp-reg_receiver 15 96
No external refs found!