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  5. Solyc04g040160.4.1

Solyc04g040160.4.1 (TIC55-IV, ACD1-LIKE,...)


Aliases : TIC55-IV, ACD1-LIKE, PTC52, Solyc04g040160

Description : Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana (sp|q8w496|ptc52_arath : 608.0)


Gene families : OG0000770 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000770_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g040160.4.1
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00127460 TIC55-IV,... Protochlorophyllide-dependent translocon component 52,... 0.04 OrthoFinder output from all 47 species
Adi_g118091 TIC55-IV,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11672 TIC55-IV,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21560 ACD1, PAO, LLS1 pheophorbide a oxygenase *(PAO) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11225 TIC55-IV,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13105 ACD1, PAO, LLS1 pheophorbide a oxygenase *(PAO) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08348 TIC55-IV,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05604 ACD1, PAO, LLS1 pheophorbide a oxygenase *(PAO) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07297 TIC55-IV,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04106.t1 TIC55-IV,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene10046.t1 TIC55-IV,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01937 ACD1, PAO, LLS1 pheophorbide a oxygenase *(PAO) & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g06413 TIC55-IV,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G050300.1 TIC55-IV,... not classified & original description: pacid=50610352... 0.02 OrthoFinder output from all 47 species
Ceric.27G047600.1 ACD1, PAO, LLS1,... pheophorbide a oxygenase *(PAO) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000681.17 TIC55-II Protein TIC 55, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Cre11.g476500 TIC55-IV,... Protein TIC 55, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g05098 TIC55-IV,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g15141 TIC55-IV,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06958 TIC55-IV,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06233 TIC55-IV,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g15086 ACD1, PAO, LLS1 pheophorbide a oxygenase *(PAO) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06903 TIC55-IV,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07674 TIC55-IV,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g09870 ACD1, PAO, LLS1 pheophorbide a oxygenase *(PAO) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025446001 TIC55-IV,... Protochlorophyllide-dependent translocon component 52,... 0.08 OrthoFinder output from all 47 species
Gb_35364 TIC55-IV,... Protochlorophyllide-dependent translocon component 52,... 0.03 OrthoFinder output from all 47 species
Gb_35365 TIC55-IV,... Protochlorophyllide-dependent translocon component 52,... 0.03 OrthoFinder output from all 47 species
Gb_36694 TIC55-IV,... Protochlorophyllide-dependent translocon component 52,... 0.02 OrthoFinder output from all 47 species
LOC_Os03g05310.1 ACD1, PAO, LLS1,... pheophorbide a oxygenase (PAO) 0.03 OrthoFinder output from all 47 species
LOC_Os03g59120.1 TIC55-IV,... Protochlorophyllide-dependent translocon component 52,... 0.06 OrthoFinder output from all 47 species
Len_g21609 TIC55-IV,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g06032 ACD1, PAO, LLS1 pheophorbide a oxygenase *(PAO) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25027 TIC55-IV,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g32038 TIC55-IV,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp6g13750.1 TIC55-IV,... Protochlorophyllide-dependent translocon component 52,... 0.03 OrthoFinder output from all 47 species
Nbi_g11029 TIC55-IV,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04262 TIC55-IV,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08953 TIC55-IV,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g62298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07246 TIC55-IV,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18566 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15132 TIC55-IV,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15427 ACD1, PAO, LLS1 pheophorbide a oxygenase *(PAO) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e006067_P001 TIC55-IV,... Protochlorophyllide-dependent translocon component 52,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEA Interproscan
MF GO:0051537 2 iron, 2 sulfur cluster binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR013626 PaO 303 405
IPR017941 Rieske_2Fe-2S 87 169
No external refs found!