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  5. LOC_Os10g42490

LOC_Os10g42490 (Os10g0575600)


Aliases : Os10g0575600

Description : 27.3.22 RNA.regulation of transcription.HB,Homeobox transcription factor family homeobox-7 (HB-7)


Gene families : OG_01_0000088 (Gene family) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os10g42490
Cluster HCCA cluster: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AT1G34650 HDG10 homeodomain GLABROUS 10 0.03 Gene family
AT1G79840 GL2 HD-ZIP IV family of homeobox-leucine zipper protein with... 0.02 Gene family
AT4G04890 PDF2 protodermal factor 2 0.07 Gene family
AT4G21750 ATML1 Homeobox-leucine zipper family protein / lipid-binding... 0.06 Gene family
AT5G07260 No alias START (StAR-related lipid-transfer) lipid-binding domain 0.02 Gene family
AT5G46880 HDG5, HB-7 homeobox-7 0.03 Gene family
GSVIVT01012643001 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.01 Gene family
GSVIVT01013073001 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.06 Gene family
LOC_Os04g53540 Os04g0627000 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
LOC_Os08g08820 Os08g0187500 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
MA_10318273g0010 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
MA_103885g0010 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.01 Gene family
MA_10426189g0030 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
MA_10433688g0010 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
MA_1086446g0020 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.01 Gene family
MA_17048g0010 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
MA_201415g0010 No alias 29.4 protein.postranslational modification Ca2+regulated... 0.02 Gene family
MA_305431g0010 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
MA_602026g0010 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
MA_602026g0020 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
MA_93471g0010 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.01 Gene family
MA_9455995g0010 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.01 Gene family
Solyc01g091630.3.1 Solyc01g091630.3 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Solyc02g080260.3.1 Solyc02g080260.3 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.04 Gene family
Solyc03g026070.3.1 Solyc03g026070.3 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.01 Gene family
Solyc03g120620.3.1 Solyc03g120620.3 33.99 development.unspecified Glabra 2, a homeodomain... 0.02 Gene family
Solyc06g072310.3.1 Solyc06g072310.3 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Solyc08g076370.3.1 Solyc08g076370.3 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Zm00001d000247 GRMZM2G118063 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.04 Gene family
Zm00001d002234 GRMZM2G001289 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Zm00001d018225 GRMZM2G145690 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.04 Gene family
Zm00001d019477 GRMZM2G109252 33.99 development.unspecified Encodes a homeobox-leucine... 0.01 Gene family
Zm00001d024701 GRMZM2G004957 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.08 Gene family
Zm00001d026351 GRMZM2G122897 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Zm00001d030069 GRMZM2G123140 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.04 Gene family
Zm00001d037140 GRMZM2G004334,... 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Zm00001d040090 GRMZM2G026643 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.04 Gene family
Zm00001d044973 GRMZM2G062318 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Zm00001d052133 GRMZM2G126646 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 135 190
IPR002913 START_lipid-bd_dom 350 581
No external refs found!