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  5. Solyc04g026020.3.1

Solyc04g026020.3.1 (Solyc04g026020)


Aliases : Solyc04g026020

Description : Protein SIEVE ELEMENT OCCLUSION B OS=Arabidopsis thaliana (sp|q9ss87|seob_arath : 473.0)


Gene families : OG0009349 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009349_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc04g026020.3.1

Target Alias Description ECC score Gene Family Method Actions
AT3G01670 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.08 OrthoFinder output from all 47 species
AT3G01680 No alias CONTAINS InterPro DOMAIN/s: Mediator complex subunit... 0.05 OrthoFinder output from all 47 species
GSVIVT01032348001 No alias Protein SIEVE ELEMENT OCCLUSION B OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01032352001 No alias Protein SIEVE ELEMENT OCCLUSION B OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01032353001 No alias Protein SIEVE ELEMENT OCCLUSION B OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01032357001 No alias Protein SIEVE ELEMENT OCCLUSION B OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_39915 No alias Protein SIEVE ELEMENT OCCLUSION A OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0016020 membrane IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR027942 SEO_N 99 388
IPR027944 SEO_C 556 787
No external refs found!