Solyc04g016370.3.1 (ATINO80, INO80, Solyc04g016370)

Aliases : ATINO80, INO80, Solyc04g016370

Description : ATPase component Ino80 of chromatin remodelling complex

Gene families : OG0003922 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003922_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g016370.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00053p00190690	ATINO80, INO80,...	Chromatin organisation.chromatin remodeling...	0.04	OrthoFinder output from all 47 species
Adi_g005520	ATINO80, INO80	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Adi_g107416	ATINO80, INO80	ATPase component *(Ino80) of chromatin remodelling...	0.02	OrthoFinder output from all 47 species
Ala_g22698	ATINO80, INO80	ATPase component *(Ino80) of chromatin remodelling...	0.12	OrthoFinder output from all 47 species
Als_g16558	ATINO80, INO80	ATPase component *(Ino80) of chromatin remodelling...	0.03	OrthoFinder output from all 47 species
Aob_g12486	ATINO80, INO80	ATPase component *(Ino80) of chromatin remodelling...	0.05	OrthoFinder output from all 47 species
Aop_g19078	ATINO80, INO80	ATPase component *(Ino80) of chromatin remodelling...	0.04	OrthoFinder output from all 47 species
Ceric.02G047900.1	ATINO80, INO80,...	ATPase component *(Ino80) of chromatin remodelling...	0.09	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021501.9	ATINO80, INO80	Chromatin organisation.chromatin remodeling...	0.02	OrthoFinder output from all 47 species
Dcu_g11743	ATINO80, INO80	ATPase component *(Ino80) of chromatin remodelling...	0.1	OrthoFinder output from all 47 species
Dde_g25805	ATINO80, INO80	ATPase component *(Ino80) of chromatin remodelling...	0.08	OrthoFinder output from all 47 species
Ehy_g12559	ATINO80, INO80	ATPase component *(Ino80) of chromatin remodelling...	0.04	OrthoFinder output from all 47 species
GSVIVT01033231001	ATINO80, INO80	Chromatin organisation.chromatin remodeling...	0.13	OrthoFinder output from all 47 species
Gb_04007	ATINO80, INO80	ATPase component Ino80 of chromatin remodelling complex	0.05	OrthoFinder output from all 47 species
LOC_Os03g22900.1	ATINO80, INO80,...	ATPase component Ino80 of chromatin remodelling complex	0.14	OrthoFinder output from all 47 species
Lfl_g05043	ATINO80, INO80	ATPase component *(Ino80) of chromatin remodelling...	0.05	OrthoFinder output from all 47 species
MA_3312g0010	ATINO80, INO80	ATPase component Ino80 of chromatin remodelling complex	0.08	OrthoFinder output from all 47 species
Mp8g00130.1	ATINO80, INO80	ATPase component Ino80 of chromatin remodelling complex	0.09	OrthoFinder output from all 47 species
Msp_g14197	ATINO80, INO80	ATPase component *(Ino80) of chromatin remodelling...	0.02	OrthoFinder output from all 47 species
Nbi_g02503	ATINO80, INO80	ATPase component *(Ino80) of chromatin remodelling...	0.05	OrthoFinder output from all 47 species
Ore_g02728	ATINO80, INO80	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g16643	ATINO80, INO80	ATPase component *(Ino80) of chromatin remodelling...	0.03	OrthoFinder output from all 47 species
Pir_g13631	ATINO80, INO80	ATPase component *(Ino80) of chromatin remodelling...	0.04	OrthoFinder output from all 47 species
Ppi_g08475	ATINO80, INO80	ATPase component *(Ino80) of chromatin remodelling...	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023246	ATINO80, INO80	ATPase component *(Ino80) of chromatin remodelling...	0.08	OrthoFinder output from all 47 species
Smo444050	ATINO80, INO80	Chromatin organisation.chromatin remodeling...	0.09	OrthoFinder output from all 47 species
Zm00001e001678_P001	ATINO80, INO80,...	ATPase component Ino80 of chromatin remodelling complex	0.17	OrthoFinder output from all 47 species
Zm00001e038194_P002	ATINO80, INO80,...	ATPase component Ino80 of chromatin remodelling complex	0.11	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0061630	ubiquitin protein ligase activity	IEP	HCCA
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR020838	DBINO	345	473
IPR001650	Helicase_C	1204	1313
IPR000330	SNF2_N	596	884

External Links

No external refs found!

Solyc04g016370.3.1 (ATINO80, INO80, Solyc04g016370)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation