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  5. Solyc04g014550.3.1

Solyc04g014550.3.1 (Solyc04g014550)


Aliases : Solyc04g014550

Description : no hits & (original description: none)


Gene families : OG0003649 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003649_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g014550.3.1
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00247530 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00110p00070440 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT5G37478 No alias TPX2 (targeting protein for Xklp2) protein family 0.23 OrthoFinder output from all 47 species
Als_g15651 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15652 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32505 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene08613.t1 Aspi01Gene08613 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0213.g058285 No alias not classified & original description: CDS=272-1780 0.03 OrthoFinder output from all 47 species
GSVIVT01011508001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01026314001 No alias No description available 0.16 OrthoFinder output from all 47 species
GSVIVT01026315001 No alias No description available 0.23 OrthoFinder output from all 47 species
Gb_13279 No alias Protein TPX2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g11400.1 LOC_Os03g11400 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g13650.1 LOC_Os09g13650 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_10432452g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_2263g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g28682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g29711 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006264 No alias not classified & original description: CDS=1-1533 0.02 OrthoFinder output from all 47 species
Tin_g44369 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e009664_P002 Zm00001e009664 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR027329 TPX2_C 75 131
No external refs found!