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  5. Solyc04g011430.3.1

Solyc04g011430.3.1 (ATUBC7, UBC7, Solyc04g011430)


Aliases : ATUBC7, UBC7, Solyc04g011430

Description : component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2 ubiquitin-conjugating component Ubc7/13/14 of HRD1 E3 ubiquitin ligase complex


Gene families : OG0001574 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001574_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g011430.3.1
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AT5G59300 ATUBC7, UBC7 ubiquitin carrier protein 7 0.02 OrthoFinder output from all 47 species
Azfi_s0392.g067779 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.03 OrthoFinder output from all 47 species
Dde_g03186 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.03 OrthoFinder output from all 47 species
GSVIVT01034196001 UBC13 Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
LOC_Os05g38550.1 ATUBC7, UBC7,... component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2... 0.06 OrthoFinder output from all 47 species
MA_10278819g0010 UBC13 E2 ubiquitin-conjugating component Ubc7/13/14 of HRD1 E3... 0.03 OrthoFinder output from all 47 species
Nbi_g16559 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.06 OrthoFinder output from all 47 species
Pnu_g29684 UBC13 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.02 OrthoFinder output from all 47 species
Ppi_g02618 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.04 OrthoFinder output from all 47 species
Ppi_g42072 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.03 OrthoFinder output from all 47 species
Spa_g54621 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 9 158
No external refs found!