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  5. Solyc04g009430.3.1

Solyc04g009430.3.1 (SRT2, AtSRT2, Solyc04g009430)


Aliases : SRT2, AtSRT2, Solyc04g009430

Description : histone deacetylase (SRT). sirtuin-type lysine deacetylase


Gene families : OG0007481 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007481_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc04g009430.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00253090 SRT2, AtSRT2,... Protein modification.acetylation.sirtuin-type lysine deacetylase 0.04 OrthoFinder output from all 47 species
GSVIVT01022342001 SRT2, AtSRT2 Protein modification.acetylation.sirtuin-type lysine deacetylase 0.04 OrthoFinder output from all 47 species
Spa_g18748 SRT2, AtSRT2 SIRTUIN-type histone deacetylase *(SRT) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0070403 NAD+ binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP HCCA
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR003000 Sirtuin 117 331
No external refs found!